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I'm Holly Wayment, and this is Pediatrics Now, cases, updates,
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and discussions for the busy pediatric practitioner.
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Today, I'm bringing you this fascinating talk from Grand Rounds.
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This episode is eligible for MOC credit. Let's listen in.
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Music.
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So today, we're going to talk about genetics for the pediatrician.
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I would love for this to be interactive.
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I know it's Zoom. I wish I were there in the room with you. The goal is really
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to make this fun and interactive and simple.
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And the reason I have our zebras is we all cave into stereotypes.
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All geneticists come with their zebras. But in medicine, we talk about a lot,
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if you hear hoofbeats, think horses, not zebras.
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And geneticists, of course, like to showcase their zebras.
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But my main point is, You, as pediatricians, can see the difference between a horse and a zebra.
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And a rare disease doesn't mean it's mysterious.
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It just means that you have to have seen it before to know what it is and to
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know the signs and symptoms associated with it.
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And you can really make these diagnoses. disease.
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So I don't have any disclosures and all of these cases are true cases,
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but I did change the pictures for most of them just so to protect patient confidentialities
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and minor, minor case details.
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We're going to do some simple things. We're going to correctly identify top
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scenarios, those top genetics consults that I see in my daily clinics.
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We're going to understand basic categories of genetic disorders and tests.
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And the way we're going to do that is we're going to know our genetics history.
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It makes it so much easier to categorize these disorders as what category are
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we in and what decade could I have diagnosed this if I were practicing?
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When did genetics even start? When could you become a geneticist?
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So by understanding the history and the decade where testing became available,
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we'll in turn understand the broad genetic categories and how we place our patients
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we see in clinic into those categories in order to know what
Load full transcript
to test when.
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And we're going to also consider briefly the risk versus the benefits of genetic
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testing so that we're not overwhelmed by these tests.
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And we can really focus on what all of you do best, which is engaging,
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interacting, and seeing your beautiful patient.
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So it's going to be a rapid approach, but you don't have to remember the details.
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It's more the philosophy that.
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I've learned by being with these patients for almost 20 years.
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So we're going to get objective one over with really fast.
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What are some of the top 10 genetic consults that I see in my general genetics clinic?
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I also do craniofacial vascular clinics as well. It's a lot of fun.
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But in my general bread and butter genetics clinic, I see a lot of autism.
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I see some patients with epilepsy, multiple congenital anomalies.
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My mentor used to tell me a rule of threes, three differences,
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such as a congenital heart disease, short stature, features that are different from the family.
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And now we're thinking maybe there is a genetic condition that ties the pieces of the puzzle together.
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Those neurocutaneous disorders, neurofibromatosis, tuberous sclerosis,
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those patients with sensory neural hearing loss, our connective tissue disorders.
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Does this patient have Marfan syndrome?
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We get a lot of referrals for Erlos-Danlos, but good news, you can't make that
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diagnosis unless somebody is post-puberty nowadays.
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They've changed the criteria so we can really focus on our patients in a new, different way.
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Skeletal dysplasia, movement disorders, newborn screening, metabolic disorders.
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These are kind of our top 10 categories where you think of referring to a geneticist.
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And most of the time, the patients I'm interacting with in clinic.
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And we also, throughout this lecture, objective number two, we're really going
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to think in terms of these broad genetic categories.
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This is the slide I'm going to focus on for actually a couple of minutes and
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kind of the work portion of this lecture, because it's so important to understand
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the categories, but to really memorize those categories.
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Were next to me to go through kind of genetics by the decade and put the categories
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in context with the history.
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But before I launch into the categories, I want to tell you a brief personal anecdote.
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So when I first became a genetics attending and I got a new job,
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my lovely, beautiful boss was so excited by my arrival and the extra help that
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she immediately went to a conference and then vacation.
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So I saw this baby who had microalpthalmia, deep set eyes, post-axial polydactyly.
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And I sat there and I wrote the most beautiful note.
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And I said, there was a differential and it included Smith-Lemley-Opeth syndrome and Joubert syndrome.
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And I had a long lift. And then she came back, took one look at the baby and said, I'm dead.
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You didn't send a karyotype for trisomy 13. This baby has trisomy 13.
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And I thought, am I going to be fired today? Because I had never seen a baby
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with trisomy 13 in my fellowship that didn't have a cleft palate or holoprosencephaly,
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but she did fire me. She was lovely.
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And then had me follow up with the patient where I told the patient,
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you're having a lot of apnea.
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I was was concerned because so many patients with trisomy 13 passed away,
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but that patient, here I was wrong again, that patient was one of the 10% long-term survivors.
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And that patient happened, the mother happened to take her to the playground
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where my children played for the next six years that I lived in Rhode Island.
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And it taught me, we became quite unfriendly terms,
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but I've always remember two things from that encounter that the first thing
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I want to do when I get to the bedside is I don't want to miss a major chromosomal category.
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There are only five reasons we still send chromosomes for big disorders.
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Trisomy 21, 18, 13, Turner, Klinefelter.
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And we also send in mothers with recurrent miscarriages since they might have
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a balanced translocation.
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And otherwise, we rarely send our chromosomes, but I will never miss a trisomy
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13 or major chromosomal abnormality again.
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And
I also learned how little I know about prognosis and to remember those 10%
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of long-term survivors, even with complicated things like trisomy 13 and 18.
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So none of my fellows or residents missed that category.
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We start with And then we have the microdeletion duplication syndromes where
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you're not missing a whole chromosome, but you're missing a small piece of chromosome,
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maybe containing about 20, 23 genes.
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It could be missing, it could be doubled. And those are your classic microdeletion
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pediatric board syndromes.
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You all know 22q11 deletion syndrome, Williams, Smith-Beginnis,
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where they have the behavioral problems and trouble sleeping,
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Kredischat, Wolf-Hirschhorn.
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And now, of course, you have hundreds and hundreds of micro deletion duplication
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syndromes. And you can go on rarechromo.org if there's a new one you haven't heard of.
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But your main idea is that it's groups of genes missing or added.
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So you really will be seeing...
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What we call dysmorphic features are features different than the parents,
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unless the parent is also affected with the same microdeletion duplication syndrome,
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which happens all the time.
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But you'll be seeing differences on their physical exam most of the time when
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you have a chromosomal microdeletion syndrome.
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Next, we have our single gene testing category.
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Again, this slide is kind of the bulk of the work. But if you don't know your
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categories, you're not going to know where to kind of put a patient. shift.
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So single gene disorders, this is one gene at a time out of our 20,000 genes.
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A patient comes and they have very tall stature and they have a pectus and they
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have aortic dilation and they have a positive wrist sign and a thumb sign.
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And you're thinking they might have Marfan syndrome, a change in just one fibrillin
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gene out of the 20,000, like 90% of people who meet that Gantt score calculator do.
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This is a single gene disorder.
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Next, we have our repeat disorders. That is where, and there are only about
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five of them for you all
to remember for all of your boards,
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but that is where, for example, you have a child with intellectual disability
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and that child has a long face and you start thinking about fragile X and they
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have CGG repeats greater than 200,
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which affects the FMR1 gene and causes differences in brain development.
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And you only have to know about five repeat disorders.
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Then we have our next generation sequencing, where instead of testing one gene
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at a time, like for epilepsy, we test based on their presentation.
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So we'll put 100 genes for epilepsy, and we'll sequence all 100 at the same time.
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Next, we have our methylation disorder category, where you have the same sequence
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of DNA, but there's a change in expression, such as Angelman syndrome,
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Prader-Willi syndrome, Beckwith-Wiedemann syndrome,
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Russell-Silver syndrome, some types of diabetes.
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There aren't that many of those either. there.
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Next, we have our exome where we're going through all the 20,000 genes,
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those exiting portions, and we're closely analyzing those exons that might fit
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into the clinical phenotype that we write down for those labs because they really
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can't focus on everything.
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They're going to to analyze better the exons where there might be a clinical disorder.
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And now we have genome as well, where it's like the exome plus the microarray. But guess what?
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Many genomes do not pick up some of the repeat disorders and some of the methylation disorders.
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So genome does not mean that you've done every genetic test.
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So I know that's a very kind of hard slide, and I've talked a mile a minute,
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but we're going to break this slide down and think in terms of categories,
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which makes it a lot more fun and easy to remember.
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So, if you think about the expansion of genetics over the last decade,
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which is projected to continue, it really can be very overwhelming.
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Which category am I in? What test do I order? Do I just genome everybody?
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And by, again, looking at the history, we can make it less overwhelming and
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we can think in context of the decades and how we can still be with our patients.
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So I know there's this idea that Texans have a lot of pride.
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I don't know if that's true or not.
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I've only been to Texas twice, but I know you know that you became a state in in 1845.
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And so does anybody know when Hawaii and Alaska became a state and why that's
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important, why that was a very important year for geneticists?
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They became a state in 1959.
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And the 1950s were a very exciting year for geneticists because before the 1950s,
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you could be a cardiologist, you could be a pediatrician, but you couldn't be a geneticist.
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In 1953, that's when Watson and Crick resolved the DNA structure of the double helix. There they are.
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In 1956, Tiho and Levin discovered that human cells contain 46 chromosomes.
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And then Lejeune in Paris in 1959 discovered that patients with Down syndrome had trisomy 21,
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the same year Alaska and Hawaii became states that I'm sure all of you have,
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many of you have traveled to and enjoy.
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And so here we are with our chromosomes, three copies.
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They had trisomy 21. Unfortunately, in the 1950s, many of these patients were
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institutionalized and marginalized.
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However, now we know with great loving care, these kids are such a joy and can
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grow up doing all sorts of things.
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And it's a lot of fun to interact in my daily clinics with many of the kids
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that have Abdown syndrome.
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So in the 1950s, you can see the ads about starting soda early.
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They say how soon is too soon and that drinking the soda can help you fit in.
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So hopefully we've learned a lot in the 1950s and we're no longer giving our
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babies the same baby bottles full of, you know, these soda drinks,
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although we are giving them our smartphones now and I'm not sure what's better
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or worse for brain development.
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But in the 1950s, we could start diagnosing trisomy 21, 18, 13,
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Klinefelter and Turner syndrome. And that was about it.
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And through the 1960s, the techniques with banding became more elaborate.
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And maybe all these kids that were
growing up on all the candy,
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one can argue that they pursued some other things in the 1970s.
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But regardless, meanwhile, here was Singer sequencing DNA in the 1970s for the first time.
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And then genomics began to amplify in the 1980s.
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And you started to be able to discover by the end of the 1980s,
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Francis Collins, there he is shaking somebody's Craig Ventures hand,
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but he was kind of the rock hero of genetics.
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And he actually plays genetic songs that everybody wants to go on YouTube.
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He plays the guitar. He's sort of the rock star of our field because he was
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the one in combination with Dr.
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Chi that sequenced one of the biggest genes, the CFTR gene.
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So remember when you were growing up or some of us, a lot of you are younger
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than I am, but you were growing up with your speaking spells and your cabbage touch kids in the 1980s.
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And this was happening at the same time, because if you could sequence the largest
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gene, that means you could sequence all the genes.
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So before Before late 1980s, early 1990s, you could not verify a diagnosis of
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Marfan syndrome. It was all clinical.
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And then in the 1990s, not that much happened with testing except,
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remember the fish probes, is anybody as old as I am, where you could start to fish,
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meaning that if you had a group Proof of genes missing, you could design a fluorescent
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probe for something like 22q11 deletion syndrome,
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Wolff-Hirschhorn, Creedish, Schatz, Smith-McGinnis, Williams,
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and you could go after that one condition.
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And just to break it up, because I know it's early in the mornings.
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That was the top song in 1990
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rock set when all this fish stuff was happening just to bring you kind of back
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and wake you up in the morning but at that point i when i started training as
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a fellow i was so happy i was the tourist trap version of genetics because they
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were so academic They got to spend an hour with the patients.
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They could only order chromosomes and fish. Can you imagine?
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That was so much fun. So as the decades went
forward, we got the Human Genome Project.
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And here, if you remember, and this is not political, this is just about history,
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but here's Clinton with Francis Collins and Craig Venture.
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Francis Collins led the public effort for the sequencing of the Human Genome Project.
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And many of you might remember that Craig Venture featured in all these Time magazines of the year.
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He led the private effort, but then he ended up making that private information
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public to kind of validate the public genome.
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And by the year 2000, there was the first rough draft where,
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again, if you could sequence one gene, you can sequence all the genes.
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And now we could start testing for those single gene disorders.
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And, well, the year 2000, and let me just tell you what the top song was then.
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Were any of you Faith Hill fans, that was the top song in the year 2000.
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And while that was happening, something very interesting happened.
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These genome companies started popping up. And I had a very good friend, mentor.
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She was a lab director at Einstein, really good clinician. and her best friend
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went to work for one of these genetic companies.
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And they were kind of in their heyday. They were offering very expensive tests.
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And so her friend got the, you know, million dollar mansion.
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And I remember thinking, that's not why I went into medicine.
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But I could see that a lot of people were going to these companies and those
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tests were very expensive.
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And suddenly suddenly we had a new test, which was the microarray,
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where patients were getting these tests and figuring out diagnoses that they didn't know they had.
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And we were learning so much. So we went from only being able to order chromosomes,
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FISH, and a few single gene disorders like Marfan.
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We could also do some fragile X testing to suddenly being able to offer this
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to every child with major intellectual disability, delays, unusual family features,
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multiple congenital anomalies.
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And we started making a diagnosis of about 10 to 20% of kids in the year 2000.
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And so you can see, this is by Dr. Ledbetter et al. He goes through as well.
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Name your category. In the 1960s, those chromosomal disorders,
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we get better and better with span techniques.
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In the 1990s, we start recognizing microdeletion duplication syndromes.
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And in the year 2000, we start going across the genome for big pieces missing or added.
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And then something new happens. All these panels start coming out with single
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gene disorders together.
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And then Exome only emerged in 2005 or so as a major player.
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And now they're saying, if you just take somebody with autism,
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intellectual disability,
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non-dysmorphic, you have more of a 30 to 40% chance of a diagnosis with Exome
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versus your 10 to 20% chance with that SNP array looking for pieces missing.
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Are added. So it's been really interesting to practice with this exome test available.
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And then of course, in 2010, genome started emerging,
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but it's really only starting to make its way into clinic right now,
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where we're deciding, oh, do we order exome, which has a lot more data and analysis in it?
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Or again, do we order that genome, which includes, it's basically like an exome
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plus micro deletion and duplications, but it's not perfect either.
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And it has a lot more variants of unknown significance.
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So that's the framework where we are now.
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And as all of this genetic testing expands, we are challenged.
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And this has been a question since 2010.
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It was very trendy for people to write articles, genotype first.
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We just have a newborn screen. We genotype type everybody for everything.
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But I want to tell you that I truly believe that we all became doctors.
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We're pediatricians. I'm a geneticist because we like being with our patients.
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And that is still a skill.
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And AI isn't going to smile, interact with them, get to know what's special about them.
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So I would argue it's more fun.
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It's more interesting. And it's also more medically critically impactful,
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especially because if you just order all these genetic tests,
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--> 00:21:53,148
you're going to get so many variants and you won't be able to explain any of
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those variants if you haven't been with your patient to get to know them,
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their natural history and what they have and place that into context with any result you get back.
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So I want to say, let's continue on as long as we can enjoy the phenotype first model.
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And then we'll use our genotypes in a smart, very thoughtful way that keeps
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us engaged with our patients and having fun with them.
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And so there's a three-step solution for people who would like to continue,
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as long as we can ride this out, our phenotype first model.
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We do a detailed clinical analysis.
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Then we use our resources. You only need two as a pediatrician to be like a geneticist.
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Go to OMIM and do the clinical synopsis button. That will tell you the features
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of a particular disorder.
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And you can also type gene reviews with an S for any disorder.
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And it'll tell you everything any geneticist knows if you're suspecting a condition.
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So let's take this beautiful child and let's think with a phenotype-first approach.
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But there is one problem to it. You have to be there next to the patient.
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You have to actually do the work as a doctor to have this model,
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but it will save you so much time of unnecessary testing, and it'll also make life more fun.
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So let's try it for the patient I just showed you.
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So in the phenotype first approach, you think what condition might match.
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You think about the history of their present illness. So this child came and
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she had a little bit of delay and she has a father who was a little delayed.
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And when he was younger, he was obsessed with dinosaurs.
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And she is kind of obsessed with a certain television show and only wants characters from that.
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And she came in because she was a little bit small for her age.
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And on physical exam, we noticed the hyper telurism, the wide space nipples,
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and she was sent to the cardiologist and they had a little bit of pulmonic stenosis.
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So of course, our clinical conclusion is Noonan syndrome.
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And we ask ourselves, is genetic testing indicated in the first place? Well, sure.
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And we are thinking of rasopathies, the most common being PTPN11,
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which is a single gene autosomal dominant disorder. Of course,
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we could have de novo people.
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And so once we've done our clinical analysis, we suspected Noonan syndrome,
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we sent a single gene, she has Noonan syndrome.
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And 99% of the time, if we just fill in this box, we can make diagnoses quite
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easily in genetics, it's really not hard.
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It just takes the right process.
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And really, I try to get the fellows and the residents to just fill in the blanks.
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And I try to do it on every patient, every time myself.
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So if we think about it, we're going to practice doing this together,
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because practice every patient, every time makes the right approach.
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And so we see these lovely ladies and they might have a bit of a wide spaced.
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Neck. They might've come because of short stature. They may have had swollen
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hands and feet in particular when they were younger.
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They're doing well in school most of the time. They may be petite.
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And so what category are we thinking?
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We're thinking chromosomal. What decade could we have diagnosed them?
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We could have diagnosed them in 1960, right?
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And what test? Our chromosomal test.
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Please feel free in your chat to make a guess.
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Now, what about this? These lovely girls, they also have short stature.
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One of them has a cleft palate.
321
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One of them has tetralogy of fallot. They have hypocalcemia.
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One of them has immune problems. All of you are thinking, what category?
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Microdeletion duplication disorders. What decade could we have diagnosed them.
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We could have fished in the 1990s. Today, we send a chromosomal or microarray or snip array.
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Right? What about this one? What is our category? These patients have a little periorbital edema.
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They might have kind of loose joints. They may be delayed, but super social and interactive.
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They'll run in your lap. They might be small for their age.
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00:26:52,422
They may have lips that look a little bit thick as they get older and gaps between
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their teeth. They might have hypercalcemia.
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And because this is a microdeletion duplication syndrome, we have Williams syndrome.
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Again, FISH or microarray analysis, again, could have diagnosed them in 1990 or 2000.
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And with Williams syndrome, it's important, a pearl to remember is that aside
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from the supravalvular aortic stenosis, renal artery stenosis due to the elastin changes.
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Please remember to take care of these kids during anesthesia because there can
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be sudden death. So don't do unnecessary anesthesia with these children.
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And then what about this condition? Again, you're seeing facial features,
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the prominent forehead, the hyper telurism that are different.
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And most of these kids have serious epilepsy and they're diagnosed and nobody
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reminds them to go to neurology and they come in in status.
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00:27:45,722 --> 00:27:51,782
This is, again, microdeletion or duplication syndrome. Could have diagnosed them in 1990, 2000.
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We can send either our fish, which nobody ever does, or a micro-erase nip. This is Will Pershorn.
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And please remember that they really have epilepsy.
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So be proactive about getting them to a neurologist who's on board with treating
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them early and aggressively.
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And then we have these kids. Again, this was, there was an article in the New
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York Times in around 2004 talking about them.
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They have small palpebral fissures, a broad flat nose, autism.
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Because they have more facial features that are different from their parents,
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they would have been better candidates for microarray.
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They have 16p11.2 duplication, but microarray testing versus exome approach,
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which is better for those kids that are kind of non-dysmorphic severe autism.
352
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And so I already had mentioned, now we're in a new category.
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This is a child, we talked about this a little bit earlier.
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Say that a lot of my patients with connective tissue disorders,
355
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instead of the Leonardo da Vinci circle, they're ovals, right?
356
00:28:59,785 --> 00:29:04,705
Long, long arms, might have a pectus, might have a high arched
palate,
357
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may have flat feet with hind foot deformity.
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This is Marfan fibrillin mutate variant, pathogenic variant.
359
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We would have been able to diagnose him by about 1991 or 1992.
360
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And this is another patient next who has, again, a single gene disorder, short stature.
361
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I'm sure you can recognize that the single gene change in FGFR3 causes over
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inhibition of the chondrocytes.
363
00:29:35,125 --> 00:29:39,605
But what's really exciting about achondroplasia is that there are new treatments
364
00:29:39,605 --> 00:29:43,905
that stimulate those chondrocytes.
365
00:29:44,045 --> 00:29:48,865
And the two clinical pearls as a pediatrician to remember for achondroplasia
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is that if they present with sudden vomiting when they're little or severe headaches,
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they might have compression of the foramen magnum. That's an emergency.
368
00:29:59,825 --> 00:30:03,525
And you really want to monitor the head circumferences because some of these
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kids have hydrocephalus. And again, the third pearl is the treatment.
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And we would have been able to diagnose, again, her disorder by the 1990s with
371
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our single gene testing.
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And you can still use the same single gene testing in those patients or a small panel.
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If you think they have Marfan syndrome, you don't have to order an exome.
374
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And now here's another patient.
375
00:30:28,105 --> 00:30:31,325
And I mentioned this already, but just to drag the point home,
376
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so very long face, big ears.
377
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The females tend to be very shy.
378
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They can have autism too. They tend to have more prominent foreheads, joint hypermobility.
379
00:30:44,085 --> 00:30:48,225
In the males, we see the testicular enlargement, but only when they're in puberty.
380
00:30:48,225 --> 00:30:49,965
It's not like you're seeing that on a baby.
381
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And many times now we're diagnosing this when the mothers in certain states
382
00:30:56,289 --> 00:31:00,129
have prenatal screening and are found to be pre-mutation carriers,
383
00:31:00,229 --> 00:31:02,129
and then the babies will actually come.
384
00:31:02,249 --> 00:31:06,869
But otherwise, it's diagnosed very, very late. And when you diagnose one person,
385
00:31:06,929 --> 00:31:08,269
you diagnose a whole family.
386
00:31:08,489 --> 00:31:12,869
We're in the category of repeat disorders, fragile X.
387
00:31:13,009 --> 00:31:17,569
By the late 1990s, early 2000, we could test for these repeat disorders.
388
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Disorders and then now we're
389
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into our methylation and
390
00:31:25,149 --> 00:31:32,549
so we have these kids these babies the first two that baby is adorable laughing
391
00:31:32,549 --> 00:31:38,949
all the time but a horrible sleeper these parents are so tired who come and
392
00:31:38,949 --> 00:31:43,289
as the baby gets older doesn't talk might have seizures and the gait in the
393
00:31:43,329 --> 00:31:46,629
older children is very ataxic.
394
00:31:46,769 --> 00:31:54,389
And so you're thinking about Angelman, which the most best test would be a methylation test.
395
00:31:54,589 --> 00:31:59,849
We won't go into the details. And you could also do methylation tests even as
396
00:31:59,849 --> 00:32:06,669
early as in limited scenarios, as early as the 1990s, 2000s for certain conditions.
397
00:32:11,329 --> 00:32:15,969
And maybe a nevus flammus, maybe you look behind the ears, it railroad tracks,
398
00:32:16,209 --> 00:32:21,129
and this is Beckwith-Wiedemann syndrome, another disorder where methylation
399
00:32:21,129 --> 00:32:23,589
and printing tests would be your category.
400
00:32:24,429 --> 00:32:29,969
But now that we've kind of thought about the decades, thought about our genetic
401
00:32:29,969 --> 00:32:33,689
categories, in the real world.
402
00:32:34,809 --> 00:32:38,249
Things are always a little more complicated. The doctor says,
403
00:32:38,409 --> 00:32:40,649
I'm not sure of the cause. I think it could be due to alcohol.
404
00:32:40,909 --> 00:32:45,729
And the patient says, that's okay. I'll come back when you're sober.
405
00:32:45,909 --> 00:32:50,409
So the idea is that in the real world, we all have these feelings.
406
00:32:50,569 --> 00:32:53,849
Many of us, of course, it's not alcohol. It's sleep deprivation.
407
00:32:54,149 --> 00:32:59,869
It's too many sources where we are overwhelmed with our EHRs,
408
00:32:59,869 --> 00:33:04,829
our pagers, our phones, our our emails, and we have time for everything but thinking.
409
00:33:05,169 --> 00:33:10,249
And so we really need to remind everybody, look,
410
00:33:10,429 --> 00:33:15,629
we need our time to think, to sit there for five minutes with the patient and
411
00:33:15,629 --> 00:33:18,449
forget everything else and do, as I mentioned,
412
00:33:18,629 --> 00:33:24,569
that detailed clinical analysis to use our resources and consider where were
413
00:33:24,569 --> 00:33:28,849
we in the past with all this testing and what can the future bring to use the
414
00:33:28,849 --> 00:33:32,049
best of the past for this patient again.
415
00:33:32,169 --> 00:33:37,169
And that is a daily struggle for all of us in practice with this so many paper
416
00:33:37,169 --> 00:33:39,149
reality demands of us today.
417
00:33:39,269 --> 00:33:44,189
But I encourage everybody and I try to make a commitment to that every day.
418
00:33:44,309 --> 00:33:48,889
I'm going to, just like I take time to
eat or answer emails,
419
00:33:49,129 --> 00:33:52,849
I'm going to take at least five minutes with this patient and sit there and
420
00:33:52,849 --> 00:33:55,229
think. And I try to tell the fellows.
421
00:33:55,769 --> 00:34:00,749
So this was a 12-year-old. Previously, this is a true story,
422
00:34:00,929 --> 00:34:06,709
my patient, previously healthy boy who presented with increased clumsiness.
423
00:34:07,129 --> 00:34:09,849
The dad said he acted drunk sometimes.
424
00:34:10,569 --> 00:34:14,649
He had grades and concentration. His handwriting was getting worse.
425
00:34:14,849 --> 00:34:19,129
He wrestled as a sport and had some decreased performance and shortness of breath.
426
00:34:19,369 --> 00:34:24,609
And the cardiology evaluation showed some question of cardiac hypertrophy.
427
00:34:25,049 --> 00:34:30,349
And so the question was, what was the best genetic test? How do we diagnose
428
00:34:30,349 --> 00:34:32,949
them? And he went to neuromuscular clinic.
429
00:34:33,509 --> 00:34:37,569
And the question is, what would you have done? A neuromuscular panel,
430
00:34:37,769 --> 00:34:43,409
an exome, repeat disorder testing, chromosomal microarray, or methylation study?
431
00:34:43,629 --> 00:34:46,389
I can't see the chat, but I can tell you what
432
00:34:46,389 --> 00:34:51,189
the neuromuscular guess what the neuromuscular specialist did a neuromuscular
433
00:34:51,189 --> 00:34:56,969
panel right so it was negative then he came to genetics six months later with
434
00:34:56,969 --> 00:35:02,709
worsening symptoms sometimes requiring a walker so what do we do now we do our
435
00:35:02,709 --> 00:35:05,969
handy dandy approach we fill out the table.
436
00:35:07,073 --> 00:35:12,253
So we do the clinical work. He's had some ataxia, some slurred speech.
437
00:35:12,393 --> 00:35:15,473
He was falling while playing lacrosse and also in wrestling.
438
00:35:15,733 --> 00:35:21,253
He was 10, previously healthy. The exam showed decreased reflexive and a murmur.
439
00:35:21,273 --> 00:35:25,573
His echo, there was that concern about hypertrophic cardiomyopathy.
440
00:35:25,793 --> 00:35:28,533
People say never to use Google. I disagree.
441
00:35:28,773 --> 00:35:35,533
If you know what to Google, what to put in your chat GPT, these things can be useful.
442
00:35:35,533 --> 00:35:39,913
And a simple Google search would reveal that there is nothing else that causes
443
00:35:39,913 --> 00:35:46,433
ataxia, progressive degeneration, and hypertrophic cardiomyopathy except Friedrich's ataxia.
444
00:35:46,513 --> 00:35:50,933
But that's not on a neuromuscular panel. That is a repeat disorder.
445
00:35:51,313 --> 00:35:55,893
And that is what he had. So this table, just doing the table,
446
00:35:56,073 --> 00:36:00,273
could have prevented six months of an extra diagnostic odyssey.
447
00:36:00,313 --> 00:36:02,293
It's an autosomal recessive disorder.
448
00:36:02,673 --> 00:36:06,913
Each parent was a carrier. It's
on two different alleles. It's Friedreich's
449
00:36:06,913 --> 00:36:09,333
ataxia. And time is of the essence.
450
00:36:09,453 --> 00:36:14,233
So you want to do the tables and the right testing because now there's a new
451
00:36:14,233 --> 00:36:21,053
FDA-approved treatment that we are getting him on, which is an activator of nuclear factor.
452
00:36:21,373 --> 00:36:25,153
So the excitement of the Genome Project is all these new treatments.
453
00:36:25,233 --> 00:36:30,053
But if you miscategorize them and do the wrong thing, you waste time.
454
00:36:30,193 --> 00:36:38,093
And that is time away from treatment. So now, case two, to test or not to test.
455
00:36:39,121 --> 00:36:43,341
So because of my work in the Ray Helfer Society, it's a nonprofit for child
456
00:36:43,341 --> 00:36:46,481
protection, it's academic, and that's a whole saga in my life.
457
00:36:46,581 --> 00:36:51,501
But because of it, I do always like to present the other side of cases where
458
00:36:51,501 --> 00:36:55,861
we might think about, do we need to test this baby with genetic testing?
459
00:36:56,301 --> 00:37:01,781
So we have a two-month baby, also a true case of mine, reported apnea.
460
00:37:02,141 --> 00:37:05,761
Parents report previous difficult feeding and colic, otherwise healthy.
461
00:37:06,121 --> 00:37:07,401
Parents are first cousins.
462
00:37:08,161 --> 00:37:12,801
Ophthalmological exam reveals bilateral retinal hemorrhages diffusely located.
463
00:37:13,101 --> 00:37:19,081
The imaging shows subdural hematoma, many rib fractures, and the parents are
464
00:37:19,081 --> 00:37:22,561
described as very caring and nice by the bedside.
465
00:37:23,201 --> 00:37:26,561
So he's not supporting the head while on exam.
466
00:37:26,841 --> 00:37:31,881
We don't see bruising. There's hypotonia. The head is on the large side,
467
00:37:32,041 --> 00:37:35,261
and the pediatric resident who does take a history said, oh,
468
00:37:35,261 --> 00:37:36,421
oh, there's consanguinity.
469
00:37:37,161 --> 00:37:42,861
Consanguinity says this must be metabolic. And when you re-go take the history,
470
00:37:42,981 --> 00:37:46,201
the parents say, oh, maybe there was a little delay in motor skills.
471
00:37:46,361 --> 00:37:49,121
This is a tiny baby. Maybe he wasn't rolling over that well.
472
00:37:49,401 --> 00:37:51,741
He wasn't smiling that much.
473
00:37:52,041 --> 00:37:57,341
And so what do you do next? Do you follow up on the newborn screen results?
474
00:37:57,821 --> 00:38:04,621
Do you send metabolic testing, including something called a urine for C5DC.
475
00:38:04,881 --> 00:38:10,401
I'll explain what that is. Do you do a personalized sequencing panel for every metabolic disorder?
476
00:38:10,781 --> 00:38:14,321
Do you do exome testing or do you do genome testing?
477
00:38:15,635 --> 00:38:22,075
So the disorder that the resident was rightfully concerned about was glutaric acidemia type 1.
478
00:38:22,155 --> 00:38:26,635
It has an incidence of 1 in 30,000. This family was not Amish,
479
00:38:26,635 --> 00:38:28,535
by the way, where the incidence is higher.
480
00:38:28,675 --> 00:38:33,115
And it often presents with dystonia after viral illnesses.
481
00:38:33,995 --> 00:38:39,075
In this disorder, we see retinal hemorrhages in the posterior pole, not diffuse. use.
482
00:38:39,495 --> 00:38:46,055
And macrocephaly is defined as 98%, but this baby's head circumference is 90%.
483
00:38:46,055 --> 00:38:50,575
So it does have a generous head, but so do the parents when you measure their
484
00:38:50,575 --> 00:38:53,195
heads and not true macrocephaly.
485
00:38:53,995 --> 00:38:57,995
And the MRI in this disorder shows widening of the sylvan fissures,
486
00:38:58,035 --> 00:39:05,235
expansion of the CSF spaces, but this baby's MRI only shows the subdural, no other issues.
487
00:39:05,595 --> 00:39:17,355
So actually in doing the deep probe, This child's findings do not match glutaric acidemia type 1 at all.
488
00:39:17,475 --> 00:39:19,575
The retinal hemorrhages are different
489
00:39:19,575 --> 00:39:22,735
once you compare in your clinical synopsis and your gene reviews.
490
00:39:23,235 --> 00:39:26,015
The MRI findings are different.
491
00:39:27,095 --> 00:39:31,655
And in glutaric acidemia, babies don't fracture. So unfortunately,
492
00:39:32,015 --> 00:39:37,795
the multidisciplinary team believes that this is child abuse.
493
00:39:38,915 --> 00:39:44,235
But we send the testing, and the testing shows in glutaric acidemia,
494
00:39:44,315 --> 00:39:52,075
almost 100% of patients, even the low excretors, have abnormal elevated C5DC.
495
00:39:53,075 --> 00:40:00,435
And in this patient, that lab comes back normal, ruling out biochemically glutaric
496
00:40:00,435 --> 00:40:02,875
acidemia, and it is repeated three times.
497
00:40:03,055 --> 00:40:06,755
So should genetic testing be indicated in the first place?
498
00:40:07,758 --> 00:40:10,598
If you're going to do the genetic testing and variants return,
499
00:40:10,958 --> 00:40:12,938
that might be difficult to interpret.
500
00:40:13,958 --> 00:40:17,638
And there is when there's yet another handy dandy table.
501
00:40:17,818 --> 00:40:22,558
And I ask people as an exercise, let's think about the benefits versus the risks
502
00:40:22,558 --> 00:40:27,438
of genetic testing if we're testing for disorders where we have clinically and
503
00:40:27,438 --> 00:40:31,278
biochemically, for example, no suspicion whatsoever.
504
00:40:32,178 --> 00:40:37,098
And so on the one hand, if there's a diagnosis present, that's wonderful.
505
00:40:37,098 --> 00:40:37,978
Fault. That's knowledge.
506
00:40:38,198 --> 00:40:43,038
But on the other hand, if there's a misdiagnosis based on a variant or confusion,
507
00:40:43,338 --> 00:40:45,378
that can cause a lot of anxiety.
508
00:40:46,138 --> 00:40:50,758
And it can cause us to focus on the wrong things.
509
00:40:51,278 --> 00:40:56,038
If there's
a real diagnosis, there's potential for early and improved treatment. That's wonderful.
510
00:40:56,338 --> 00:41:01,258
But if there's misdiagnosis, we might blame everything on the misdiagnosis.
511
00:41:01,398 --> 00:41:07,058
Or if there's a genetic disorder like Down syndrome, we might do diagnostic
512
00:41:07,058 --> 00:41:10,578
overshadowing where every single symptom, they have fractures,
513
00:41:10,598 --> 00:41:14,118
which we don't see in Down syndrome, but we say it must be their Down syndrome.
514
00:41:14,278 --> 00:41:15,798
We don't want to do that either.
515
00:41:16,238 --> 00:41:20,838
For relatives, it can give them prenatal risk counseling, but when a diagnosis,
516
00:41:20,978 --> 00:41:25,858
a misdiagnosis is believed, there could be fear of sudden catastrophic events,
517
00:41:26,178 --> 00:41:30,578
metabolic episodes like dystonia that aren't going to actually happen in this baby.
518
00:41:30,778 --> 00:41:35,038
We want the potential to confirm a genetic diagnosis and as an explanation,
519
00:41:35,298 --> 00:41:40,418
but on the other hand, we don't wanna use an erroneous diagnosis if it's not true.
520
00:41:40,818 --> 00:41:46,898
We wanna advocate for patients using these diagnoses, but if they have a diagnosis
521
00:41:46,898 --> 00:41:49,878
that's not real, they may be considered more medically fragile,
522
00:41:50,038 --> 00:41:54,518
which could affect their adoption, home placement, future life insurance.
523
00:41:55,758 --> 00:42:00,158
Incidental finding can lead to medically actionable plans later in life.
524
00:42:00,458 --> 00:42:05,938
But again, if you find a BRCA mutation in a baby, what is the implication or
525
00:42:05,938 --> 00:42:09,438
a cardiac arrhythmia gene for their future military service?
526
00:42:09,838 --> 00:42:13,998
So we want to provide all of our latest technology and resources,
527
00:42:14,238 --> 00:42:19,278
but we also don't want to erroneously deprive vulnerable or any other children
528
00:42:19,278 --> 00:42:22,138
of their choices in genetic testing.
529
00:42:22,318 --> 00:42:27,018
So it's a hard balance. There's no easy solution, but at least let's think before
530
00:42:27,018 --> 00:42:30,538
we reflexively order exome and genome on everybody.
531
00:42:30,898 --> 00:42:36,158
So in this particular case, biochemical testing over and over again,
532
00:42:36,278 --> 00:42:42,038
the clinical findings ruled out glutaric acidemia, but another colleague before
533
00:42:42,038 --> 00:42:44,818
I arrived to this case had ordered an exome.
534
00:42:45,138 --> 00:42:51,318
And it came back with a likely pathogenic variant in glutaric acidemia,
535
00:42:51,318 --> 00:42:53,598
as well as a variant of unknown significance.
536
00:42:54,098 --> 00:42:58,618
So now she said, I was correct. I ordered the exome. I'm very good friends with
537
00:42:58,618 --> 00:43:00,958
this colleague, which has had a different of opinion.
538
00:43:02,038 --> 00:43:07,278
Then there was a likely pathogenic change in an osteogenesis imperfecta gene.
539
00:43:07,578 --> 00:43:11,918
And there was an incidental finding of hereditary hemochromatosis.
540
00:43:12,478 --> 00:43:17,358
So what do we do? We have to think about the pretest probability,
541
00:43:17,818 --> 00:43:20,838
the database and literature review, the inheritance pattern.
542
00:43:21,038 --> 00:43:25,398
We do not have to think so much about paternity and consanguinity,
543
00:43:25,398 --> 00:43:28,218
and we have to think about the phasing with these variants.
544
00:43:29,400 --> 00:43:35,880
And so what we do is we do a very simple process, just like we do simple clinical work.
545
00:43:36,060 --> 00:43:41,300
We do the same thing with variants every time. The biggest thing is our pretest
546
00:43:41,300 --> 00:43:43,860
probability, the clinical work that came first.
547
00:43:44,000 --> 00:43:46,060
Do we think this is glutaric acidemia?
548
00:43:46,260 --> 00:43:52,020
As I've told you, we do not. Then we search our databases like ClinVar,
549
00:43:52,020 --> 00:43:55,660
Franklin, Decipher for variants that have been reported.
550
00:43:56,480 --> 00:44:01,220
And how likely is this variant to be real? We think about our inheritance pattern.
551
00:44:01,380 --> 00:44:05,520
If there is one variant in an autosomal recessive disorder, that is not enough
552
00:44:05,520 --> 00:44:07,740
to call it a disorder. You need two.
553
00:44:08,000 --> 00:44:12,860
We classified the variants after that using the American College of Medical
554
00:44:12,860 --> 00:44:18,740
Genetics guidelines and pathogenic, it really causes it, likely pathogenic,
555
00:44:18,940 --> 00:44:21,960
a variant benign or likely benign.
556
00:44:22,000 --> 00:44:28,440
So we use that same genetic approach that we used for clinical approaches every
557
00:44:28,440 --> 00:44:30,320
single case, we get a variant.
558
00:44:30,740 --> 00:44:36,000
So like I said, if you have an autosomal recessive disorder,
559
00:44:36,360 --> 00:44:39,600
you need two variants, one on each allele.
560
00:44:39,720 --> 00:44:45,940
But if you look at this, there could be a situation where somebody has two variants on the same allele.
561
00:44:46,160 --> 00:44:51,760
So one gene is affected, but in autosomal recessive disorders,
562
00:44:52,060 --> 00:44:55,500
usually if you have one gene that's working, you don't have the disorder.
563
00:44:55,760 --> 00:45:01,060
So you could also be very confused and see two variants and assume the patient has a disease.
564
00:45:01,280 --> 00:45:06,240
And unless you've done phasing and you know that the variants are on opposite
565
00:45:06,240 --> 00:45:08,660
alleles, they may not have that disease.
566
00:45:08,940 --> 00:45:12,600
And so, again, I know all of this seems kind of overwhelming,
567
00:45:12,800 --> 00:45:15,380
but that's why we don't want to order genetic tests.
568
00:45:16,194 --> 00:45:19,954
And risk variants if we're
not ready to do the work when they return.
569
00:45:20,554 --> 00:45:25,394
So the true outcome was that the child was a carrier for the disorder,
570
00:45:25,594 --> 00:45:27,754
but not affected for GA1.
571
00:45:27,914 --> 00:45:34,014
Both of these variants, when the parental testing was done, were found on one allele.
572
00:45:34,114 --> 00:45:37,834
Yes, it's a coincidence that the child was a carrier for glutaric acidemia,
573
00:45:37,974 --> 00:45:41,994
but the child was unaffected. It came from one parent.
574
00:45:42,954 --> 00:45:49,054
The C5DC, like I'm saying, was normal. The serpent app was autosomal recessive,
575
00:45:49,054 --> 00:45:54,254
and there was only one variant, and you need two in this rare form of autosomal
576
00:45:54,254 --> 00:45:57,234
recessive osteogenesis imperfecta.
577
00:45:57,254 --> 00:46:02,674
So the child did not have osteogenesis imperfecta as an explanation for the rib fractures.
578
00:46:02,954 --> 00:46:06,934
And the child was affected with hereditary hemochromatosis,
579
00:46:07,114 --> 00:46:11,514
a mild form, where later in life, if you're male, you might want to give blood
580
00:46:11,514 --> 00:46:17,034
transfusion, donate blood so that your blood does not, your iron is not too
581
00:46:17,034 --> 00:46:21,214
high in your liver and so forth, but really didn't cause a problem for this baby.
582
00:46:21,414 --> 00:46:25,694
But because of this genetic testing in the civil proceedings,
583
00:46:25,874 --> 00:46:33,314
the diagnosis was made of glutaric acidemia type 1, osteogenesis type 6.
584
00:46:33,614 --> 00:46:37,834
They said that the hereditary hemochromatosis caused the child's liver injury,
585
00:46:38,054 --> 00:46:43,774
which we we believe was unfortunately from abuse and the criminal proceedings
586
00:46:43,774 --> 00:46:48,614
were dropped and the child was returned to the home. So again.
587
00:46:49,574 --> 00:46:55,174
I have kind of hoped to show you through that kind of sad case that we really
588
00:46:55,174 --> 00:46:59,954
want to think before we just reflexively send genetic testing for everybody,
589
00:47:00,014 --> 00:47:02,494
because particularly in vulnerable children,
590
00:47:02,634 --> 00:47:05,714
genetic testing is not always of benefit.
591
00:47:06,594 --> 00:47:10,754
Now on to kind of our last case in the real world.
592
00:47:10,794 --> 00:47:15,374
And this is, again, just to practice using our handy dandy tables and systematic process.
593
00:47:15,374 --> 00:47:20,434
So, this is a case that I think is a little bit more uplifting than the one
594
00:47:20,434 --> 00:47:25,254
I presented a minute ago, where there's an otherwise healthy boy with appropriate
595
00:47:25,254 --> 00:47:29,494
development and first evaluated for gait abnormalities at 11.
596
00:47:29,714 --> 00:47:34,634
He reportedly always carried his right arm at an abnormal angle when running
597
00:47:34,634 --> 00:47:39,794
and increased his gait disturbance over
the right side in the preceding two years.
598
00:47:39,794 --> 00:47:44,614
And initially, orthopedic evaluation raised concern for a tethered cord,
599
00:47:44,794 --> 00:47:51,274
but a neurological concern raised concern for right hemiparesis with a gait
600
00:47:51,274 --> 00:47:57,694
characterized by kind of the circumduction of his elbow when walking. It was really unusual.
601
00:47:58,334 --> 00:48:01,914
And so we did the clinical work.
602
00:48:02,134 --> 00:48:07,254
This was my colleague, Dr. Seth Berger, who did this case. And the child had
603
00:48:07,254 --> 00:48:09,634
an atypical gait. It was getting worse over time.
604
00:48:09,974 --> 00:48:15,254
Otherwise, a completely unremarkable examination. He was smart, doing well in school.
605
00:48:15,614 --> 00:48:20,874
And the clinical conclusion, there wasn't a lot of laboratory data, was we just don't know.
606
00:48:21,074 --> 00:48:27,774
And this is where, because exome does have, with these really neuroatypical
607
00:48:27,774 --> 00:48:33,154
disorders, a 30% to 40% diagnostic yield, he sent the testing. Okay.
608
00:48:33,848 --> 00:48:40,588
And when the testing came back, there were two variants in a gene called GCH1,
609
00:48:40,748 --> 00:48:43,488
guanosine triphosphate cyclohydroxylase.
610
00:48:43,768 --> 00:48:48,028
And because he had a really good clinical picture of an unusual gait,
611
00:48:48,128 --> 00:48:50,548
he went back and looked at those variants.
612
00:48:50,668 --> 00:48:55,748
And it turns out that they've been reported with hyperphenylalanemia in some cases.
613
00:48:55,788 --> 00:48:59,988
But in rare cases, they don't lead to what we call hyperfi.
614
00:48:59,988 --> 00:49:06,788
But rather there's a central tetrahydrobioptrin deficiency, decreasing tyrosine
615
00:49:06,788 --> 00:49:13,308
hydroxylase, and that tetrahydrobioptrin deficiency is responsible for dopamine.
616
00:49:13,568 --> 00:49:17,488
And when he looked through the literature, even though the lab had classified
617
00:49:17,488 --> 00:49:21,888
these variants as variants of uncertain significance, there were two of them.
618
00:49:21,948 --> 00:49:23,428
He did parental phasing.
619
00:49:23,548 --> 00:49:28,408
It was on opposite alleles, and it fit with the potential clinical.
620
00:49:28,728 --> 00:49:34,648
So he did more testing and he hadn't ordered a chromosomal test.
621
00:49:34,728 --> 00:49:36,028
This patient didn't have Down syndrome.
622
00:49:36,228 --> 00:49:39,768
He didn't look like a microdeletion syndrome. He didn't look like Fragile X or anything.
623
00:49:40,548 --> 00:49:44,808
The neuromuscular panel at that point was not gonna be any higher yield than
624
00:49:44,808 --> 00:49:48,928
the exome because if you have a differential of more than 25 genes,
625
00:49:49,108 --> 00:49:50,788
they're encouraging exome right now.
626
00:49:50,828 --> 00:49:55,748
Again, not on everybody, but on cases where you think that something neuroatypical
627
00:49:55,748 --> 00:50:00,128
and truly unusual is going on, it might be a reasonable approach.
628
00:50:01,108 --> 00:50:06,888
And so this is the outcome of his walk before and after.
629
00:50:07,348 --> 00:50:13,128
So you can see that before dopamine treatment, and let me play it again,
630
00:50:13,428 --> 00:50:21,468
it's much more of a subtle circular gait and his walk is a a lot better after dopamine treatment.
631
00:50:21,928 --> 00:50:26,848
So this is just to show that when you follow a clinical approach,
632
00:50:27,128 --> 00:50:31,288
even if you don't know, but you've tried your best to kind of categorize the
633
00:50:31,288 --> 00:50:37,128
patient, and then you do order a broader test like Exome because you've carefully
634
00:50:37,128 --> 00:50:41,328
thought about its use, its implications, the risks versus benefits,
635
00:50:41,608 --> 00:50:46,028
and you get variants of unknown significance back when you've really thought
636
00:50:46,028 --> 00:50:50,308
about your clinical, you can then spend some time interpreting those variants
637
00:50:50,308 --> 00:50:52,828
and you can make a difference.
638
00:50:53,028 --> 00:50:57,988
And about out of all the people that get exomes, maybe three to 5% will come
639
00:50:57,988 --> 00:51:01,308
back with something actually treatable, like in this case.
640
00:51:01,428 --> 00:51:04,988
And that's why we're really there for these patients to interact,
641
00:51:05,128 --> 00:51:09,948
engage, and always think, are we ordering something where we will identify a
642
00:51:09,948 --> 00:51:12,188
treatable condition that will have impact?
643
00:51:16,128 --> 00:51:22,148
And So just to summarize, let's all encourage a phenotype first approach.
644
00:51:22,448 --> 00:51:26,728
It's a lot more fun to engage with these beautiful patients and try to make
645
00:51:26,728 --> 00:51:30,168
a guess, even if we fail forward, even if we're wrong.
646
00:51:31,318 --> 00:51:36,258
We're really, Dr. Kamat and I were talking about how it's still better to make
647
00:51:36,258 --> 00:51:41,438
a guess of your top three because that distinguishes you as a doctor from any
648
00:51:41,438 --> 00:51:45,018
other service professional or nurse practitioner,
649
00:51:45,318 --> 00:51:49,978
physician assistant, whatever you are that brings so much joy and care for kids.
650
00:51:50,158 --> 00:51:52,958
It distinguishes you as an expert in your field.
651
00:51:53,158 --> 00:51:57,318
Then after we've named our category, thought about what decade could we have
652
00:51:57,318 --> 00:52:02,818
diagnosed them? And if we could have diagnosed them in the 1990s or year 2000s
653
00:52:02,818 --> 00:52:07,098
with a more simple test, maybe we should still use that simple test approach.
654
00:52:07,238 --> 00:52:12,218
We don't need all these extra layers of variants and a more modern approach.
655
00:52:12,398 --> 00:52:17,038
The simple test and solution works and is faster and cheaper.
656
00:52:17,278 --> 00:52:21,698
We're going to consider the benefits versus risks of ordering our tests.
657
00:52:21,958 --> 00:52:25,838
And we're going to be with our patients. And my daughter, who's about to go
658
00:52:25,838 --> 00:52:30,238
to college, was so funny. She does a lot with Best Buddies and Special Olympics.
659
00:52:30,318 --> 00:52:33,018
She's considering being a special education teacher.
660
00:52:33,218 --> 00:52:36,298
It's kind of cute. And she lectured me the other day and said.
661
00:52:36,958 --> 00:52:41,338
Mom, I bet you're not talking directly enough to your nonverbal patients because
662
00:52:41,338 --> 00:52:45,098
nonverbal patients can interact and talk too.
663
00:52:45,218 --> 00:52:47,358
They may not speak, but they can still engage.
664
00:52:47,698 --> 00:52:52,918
So following my daughter's advice, I made extra special care in my clinic last
665
00:52:52,918 --> 00:52:55,218
week to really talk to these kids.
666
00:52:55,218 --> 00:53:01,478
And it was so rewarding because they did talk back to me in their own ways,
667
00:53:01,618 --> 00:53:03,278
whether pointing or engaging.
668
00:53:03,978 --> 00:53:09,198
And that was just such a joy. So let's be with our patients and take time to think about them.
669
00:53:09,318 --> 00:53:13,298
Every patient will have a lot more fun, despite all the pressures of medicine.
670
00:53:13,878 --> 00:53:18,958
And I want to thank Dr. Kamat, who is just such a star and amazing contributor
671
00:53:18,958 --> 00:53:23,758
to the pediatric field, and all of you, my colleagues, both in the Rare Disease
672
00:53:23,758 --> 00:53:25,698
Institute and Child Protection colleagues.
673
00:53:25,778 --> 00:53:29,558
And please come visit us in D.C.
674
00:53:29,918 --> 00:53:32,478
Thank you. And I would love to take any questions.
675
00:53:33,058 --> 00:53:34,638
Yeah, I'm just...
676
00:53:35,693 --> 00:53:40,193
Curious, you mentioned things in your presentation.
677
00:53:40,773 --> 00:53:44,713
Anyway, thanks for a wonderful presentation and a joyous one.
678
00:53:45,773 --> 00:53:53,933
Where we're having to deal with relatively common tetradogenic events that occur
679
00:53:53,933 --> 00:53:56,493
as prenatal exposures but are not genetics.
680
00:53:56,593 --> 00:54:05,493
And about the sort of total ecology of running every possible genetic test and the cost of doing that.
681
00:54:05,693 --> 00:54:12,213
Financial cost as well as the clinical and emotional cost of doing all of that.
682
00:54:12,373 --> 00:54:19,913
When the child was gestated and born in a toxic environment,
683
00:54:21,253 --> 00:54:28,493
on the peninsula, organic toxins for agriculture are the most obvious one,
684
00:54:28,553 --> 00:54:31,233
which you mentioned, which is prenatal exposure to alcohol.
685
00:54:31,573 --> 00:54:34,393
Or maybe it's the mom who's on phenobarb.
686
00:54:35,693 --> 00:54:38,953
Feature disorder and how far what
687
00:54:38,953 --> 00:54:42,573
exactly how to balance this ecology in terms
688
00:54:42,573 --> 00:54:45,433
of resets the time and assets that
689
00:54:45,433 --> 00:54:48,793
we have available when we're trying to differentiate between
690
00:54:48,793 --> 00:54:52,453
let's say some rare satellite amplification syndrome
691
00:54:52,453 --> 00:54:58,853
versus prenatal exposure to alcohol i mean yeah i know a lot of people for example
692
00:54:58,853 --> 00:55:04,853
that have done a lot of research really high level research on autism and there's
693
00:55:04,853 --> 00:55:10,433
about a third of those kids that have small heads and eventually you start to think.
694
00:55:11,478 --> 00:55:15,258
Maybe this is not genetic. Absolutely.
695
00:55:15,778 --> 00:55:20,138
And it is a hard balance, but I think what you're getting at,
696
00:55:20,818 --> 00:55:24,498
and I completely agree, is that, for example, if you're thinking fetal alcohol
697
00:55:24,498 --> 00:55:26,518
syndrome, there is diagnostic criteria.
698
00:55:27,218 --> 00:55:34,018
And what I do is I just put the checklist, and then I put this patient has microcephaly,
699
00:55:34,098 --> 00:55:38,678
the small help ebrile fissures, the flattening of the bridge,
700
00:55:38,818 --> 00:55:40,718
the hockey hockey stick hand.
701
00:55:40,878 --> 00:55:43,138
This patient has the neurotypical behaviors.
702
00:55:43,438 --> 00:55:48,038
And then I tell the families that it depends on the state, but sometimes having
703
00:55:48,038 --> 00:55:51,958
the diagnosis of fetal alcohol syndrome actually helps with services.
704
00:55:52,238 --> 00:55:58,418
And sometimes that's enough. And so there are times when it might behoove them
705
00:55:58,418 --> 00:56:02,538
to hold off on further testing.
706
00:56:02,698 --> 00:56:07,698
And really instead I say to them, I think we could always do genetic testing,
707
00:56:07,838 --> 00:56:12,078
but maybe we really want to focus on this diagnosis, the services for this right
708
00:56:12,078 --> 00:56:16,418
now, and then see them back, do the developmental evaluation.
709
00:56:17,038 --> 00:56:20,538
Get their early intervention and see them back later.
710
00:56:20,538 --> 00:56:26,558
And so by really, again, spending time and thinking about what would have the
711
00:56:26,558 --> 00:56:28,138
most impact for this child,
712
00:56:28,398 --> 00:56:36,778
many families will avoid testing and are quite reasonable when you refocus them
713
00:56:36,778 --> 00:56:42,498
and say what the benefit might be of holding off and focusing on something else for a while.
714
00:56:42,498 --> 00:56:48,438
And I always tell people, if it is a teratogen, like if it's,
715
00:56:48,438 --> 00:56:56,658
I had a baby with a very, very severe cloacal abnormality and many, many other things.
716
00:56:56,838 --> 00:57:01,078
And they said, oh, this is maternal diabetes. But the mom really only had one.
717
00:57:01,800 --> 00:57:05,660
A little bit of diabetes. It was not enough to
explain the severity of the disease.
718
00:57:05,840 --> 00:57:12,320
So I do think that when there is a teratogen present that has a known disease,
719
00:57:12,620 --> 00:57:17,040
you can also use those clinical, like valproic acetatexase, that you can use
720
00:57:17,040 --> 00:57:20,240
those clinical features to try to categorize them.
721
00:57:20,440 --> 00:57:25,100
And then your discussion can follow based on how suspicious you are that it's
722
00:57:25,100 --> 00:57:26,880
fetal alcohol versus something else.
723
00:57:27,720 --> 00:57:30,820
Thank you, Dr. Natasha. There is a question from Dr. Buesgenwald.
724
00:57:30,820 --> 00:57:35,840
Can you share your favorite website resource again for looking up syndromes?
725
00:57:36,400 --> 00:57:41,440
Yes. So I use two sites. When you go to OMA, which is, you know,
726
00:57:41,440 --> 00:57:45,560
free, it's very overwhelming if you do a disorder like Noonan syndrome,
727
00:57:45,660 --> 00:57:51,200
but you have to go to the clinical synopsis section, touch clinical synopsis.
728
00:57:51,240 --> 00:57:54,540
That gives you all the little things that you want to look for at the bedside.
729
00:57:54,720 --> 00:57:59,740
And then the other one is gene reviews with an S. So if you type Noonan syndrome
730
00:57:59,740 --> 00:58:03,400
gene reviews, it's going to give you everything a geneticist would tell you.
731
00:58:03,480 --> 00:58:08,080
And so, in fact, when I make a diagnosis, I literally pull it up because I like
732
00:58:08,080 --> 00:58:10,160
to be systematic and I don't want to forget things.
733
00:58:10,220 --> 00:58:13,500
And I just go through and then I cut and paste it into my note half the time.
734
00:58:14,000 --> 00:58:18,180
I do the same thing. If there's a variant in somebody for a gene like in a Noonan,
735
00:58:18,260 --> 00:58:22,980
I literally take the clinical synopsis and then I paste it and I highlight in
736
00:58:22,980 --> 00:58:24,380
bold what the patient has.
737
00:58:24,640 --> 00:58:27,300
And if they have the diagnosis, a lot of it is going to be in bold.
738
00:58:27,300 --> 00:58:29,080
Otherwise, it's not it, usually.
739
00:58:30,060 --> 00:58:33,980
There is a comment by Dr. Williams, very helpful approach, and thank you for
740
00:58:33,980 --> 00:58:38,040
reminding us all about the joy and importance of being with the patient.
741
00:58:38,620 --> 00:58:41,520
Thank you, Dr. Williams. And there's a question by Dr. Perlman,
742
00:58:41,700 --> 00:58:47,200
are methylation disorders and repeat disorders included in current microarray panels?
743
00:58:48,720 --> 00:58:54,560
No, they are not. There are rare, so in the SNP array, which has single nucleotide
744
00:58:54,560 --> 00:59:01,060
polymorphisms, they They do not always have the methylation included.
745
00:59:01,220 --> 00:59:06,700
However, in cases, for example, Angelman or Prader-Willi, where it's because
746
00:59:06,700 --> 00:59:09,760
they got two copies from one parent,
747
00:59:09,960 --> 00:59:14,760
then you will see the same single nucleotide polymorphisms and you'll think
748
00:59:14,760 --> 00:59:16,440
that they have two of the same chromosome.
749
00:59:17,360 --> 00:59:22,980
So some of it can inadvertently show it, but not if there's just one methylation
750
00:59:22,980 --> 00:59:24,300
difference or something. thing.
751
00:59:24,340 --> 00:59:28,700
So that is why on your boards and in real life, if you suspect Angelman,
752
00:59:28,800 --> 00:59:32,180
Prader-Willi, Russell-Silver, Beckwith-Wiedemann syndrome,
753
00:59:32,500 --> 00:59:36,900
certain diabetes things, you really want to go for the methylation test because
754
00:59:36,900 --> 00:59:43,280
that will show you every type of methylation abnormality and it won't miss them.
755
00:59:43,460 --> 00:59:47,920
But there are some cases of Angelman or Prader-Willi that are caused by microdeletion.
756
00:59:47,920 --> 00:59:51,980
There are some cases where you would see uniparental diastomy that SNP can detect,
757
00:59:51,980 --> 00:59:55,840
but your highest yield is still the methylation category, methylation test.
758
00:59:56,200 --> 00:59:57,460
That's always on your boards.
759
00:59:58,821 --> 01:00:04,101
Any other questions, comments for Dr. Schur? This is Ryan Van Ramstorst,
760
01:00:04,101 --> 01:00:07,021
Chief Medical Director for Medicaid CHIP Services in Texas.
761
01:00:07,381 --> 01:00:11,281
Dr. Schur, thank you so much. Just a public service announcement for the group.
762
01:00:11,521 --> 01:00:16,041
Because of legislation from the last legislative session, Senate Bill 989,
763
01:00:16,201 --> 01:00:17,961
which is what we call the biomarker legislation,
764
01:00:18,501 --> 01:00:23,701
the draft clinical policy for Texas Medicaid coverage of things such as whole
765
01:00:23,701 --> 01:00:27,901
genome sequencing will soon be posted to our website for public comment.
766
01:00:28,201 --> 01:00:33,621
I highly encourage all of you to take a look at that and submit a comment if you're so interested.
767
01:00:33,941 --> 01:00:39,141
Your comments help us sculpt the policy and make sure it's in line with clinical
768
01:00:39,141 --> 01:00:40,101
best practice guidelines.
769
01:00:40,441 --> 01:00:43,541
And so just wanted to make that announcement. We anticipate it's going to be
770
01:00:43,541 --> 01:00:45,101
posted within the next week or so.
771
01:00:45,281 --> 01:00:48,441
I'll put a link in the chat to the website where it's going to be posted.
772
01:00:48,541 --> 01:00:51,281
So just wanted to make that announcement because of this wonderful presentation
773
01:00:51,281 --> 01:00:52,541
this morning. Thanks, y'all.
774
01:00:53,181 --> 01:00:58,801
I'm so jealous. I wish that our Medicaid would come to some of of our genetics lectures.
775
01:00:58,981 --> 01:01:02,621
I'm so jealous of how things are being done in your area.
776
01:01:03,181 --> 01:01:07,121
That's wonderful that you're working together on this. That's amazing.
777
01:01:07,521 --> 01:01:10,161
See, we can learn from other states.
778
01:01:11,061 --> 01:01:12,361
I'm going to tell them that.
779
01:01:16,080 --> 01:01:21,520
Music.
780
01:01:18,821 --> 01:01:20,661
Thank you for listening to that
781
01:01:20,661 --> 01:01:25,061
wonderful talk. Click on the link in this podcast for free credit. it.
782
01:01:25,601 --> 01:01:30,321
I'm Holly Wayment, and you're listening to Pediatrics Now. I'll see you next time.